Omar Arias-Gaguancela
@OmarArias-GaguancelaLanguage Breakdown
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I-Shaped Developer
I-shapedSpecialist — deep expertise in Python
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14
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MD_quick_plot helps you plot MD simulation data figures using structural and trajectory files. Compatible formats include GROMACS, AMBER, CHARMM, and NAMD.
MDlens is a Google Colab-based Python notebook for comparative analysis of multiple protein–ligand MD simulations
Control VMD2 via Claude MCP. Load structures, visualize trajectories, measure distances, and render images using natural language.
Notebook for RMSX Analysis
Python package to run molecular dynamics simulation of a protein-ligand complex in a single line of code.
Open-source pipelines for mutation and CNV analysis, pathway and GO enrichment in leukemia datasets.
Pipelines for the analysis of DIA and PRM proteomics data
md-quick-plot-web
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